refactor: update import statements to use .js extensions

- Changed all import statements across the project to include the .js extension for consistency and to comply with ES module standards.
- Updated imports in various files including bootstrap.ts, shutdown.ts, config.ts, and many others.
- Ensured that all related modules and types are correctly imported with the new extension.

src/database/schema.ts

@@ -14,7 +14,7 @@ import {
   sqliteTable,
   text as sqliteText,
 } from "drizzle-orm/sqlite-core";
-import { config } from "../config.ts";
+import { config } from "../config.js";
 
 // PostgreSQL Schema
 // ==================