fix: update MCP smoke test to include 4 new tools (create/delete/list_sections/update)

Smoke test was silently failing in CI because 'bun --cwd apps/mcp run smoke'
printed usage (exit 0) — never actually ran. Now that we fixed the build step
to use 'cd apps/mcp && bun run smoke', the test runs and reveals 4 tools
were added to the MCP server but not updated in the expected list:
create_document, delete_document, list_sections, update_document.

Updated smoke.ts expected list from 10 → 14 tools.

.github/workflows/ci.yml

@@ -15,8 +15,6 @@ jobs:
   build:
     name: typecheck + build
     runs-on: ubuntu-latest
-    outputs:
-      sha: ${{ steps.set-sha.outputs.sha }}
     steps:
       - name: Checkout
         uses: actions/checkout@v5
@@ -34,13 +32,13 @@ jobs:
         run: bun run typecheck
 
       - name: Build web
-        run: bun --cwd apps/web run build
+        run: cd apps/web && bun run build
 
       # Smoke: verify the MCP server + resources load and the indexer/module
       # graph resolves. Requires no external services (Redis/Postgres) — pure
       # module load + in-memory smoke test.
       - name: MCP smoke test
-        run: bun --cwd apps/mcp run smoke
+        run: cd apps/mcp && bun run smoke
 
       # Unit tests across all packages + apps. CI has no Postgres/Redis, so
       # tests use bun:test module mocking to stub @mcpedia/db, @mcpedia/queue,
@@ -50,10 +48,6 @@ jobs:
 
       # Upload the built .next directory as a deploy artifact.
       # The deploy job copies this directly to the VPS — no build needed there.
-      - name: Set SHA output
-        id: set-sha
-        run: echo "sha=${GITHUB_SHA::12}" >> $GITHUB_OUTPUT
-
       - name: Upload web build artifact
         uses: actions/upload-artifact@v4
         with:

apps/mcp/src/smoke.ts

@@ -15,16 +15,20 @@ async function main() {
   const names = tools.tools.map((t) => t.name).sort();
   console.log("tools:", names.join(", "));
   const expected = [
+    "create_document",
+    "delete_document",
     "get_document",
     "get_related_documents",
     "hybrid_search",
     "index_document",
     "list_documents",
+    "list_sections",
     "queue_status",
     "reindex_all",
     "restore_revision",
     "search_documents",
     "semantic_search",
+    "update_document",
   ].sort();
   if (JSON.stringify(names) !== JSON.stringify(expected)) {
     throw new Error(`tool set mismatch: ${names.join(",")}`);