docs: update README to reflect new tools and features in the Zesdex system

README.md

@@ -15,7 +15,7 @@ Zesdex is a Rust-powered AI assistant that operates directly in your terminal vi
 - **IPC Protocol** — Bidirectional state synchronization between daemon and client processes with diff-based updates.
 - **Provider Agnostic** — Configurable AI model providers with dynamic model selection, per-role temperature/token limits, and API key management.
 
-### Tool System (28 built-in tools)
+### Tool System (33 built-in tools)
 
 | Category | Tools |
 |----------|-------|
@@ -26,17 +26,17 @@ Zesdex is a Rust-powered AI assistant that operates directly in your terminal vi
 | **Memory** | `remember`, `recall`, `forget` |
 | **Planning** | `plan_enter`, `plan_ready`, `seqthink` |
 | **Workflow** | `workflow_run`, `note_finding` |
-| **Utility** | `cd`, `dir_list`, `dir_cache_update`, `pong`, `todowrite` |
+| **Utility** | `cd`, `dir_list`, `dir_cache_update`, `pong`, `todowrite`, `todofinish` |
+| **LSP** | `lsp_connect`, `lsp_diagnostics`, `lsp_hover`, `lsp_completion`, `lsp_definition`, `lsp_references`, `lsp_disconnect` |
 
 ### Intelligence
 
 - **Workflow Engine** — Orchestrate complex multi-step tasks with parallel sub-agents, pipelines, and phased execution. Spawn independent workers that share findings in real-time.
 - **Self-Learning** — Persistent memory system that stores lessons, references, and project knowledge across sessions. Memories include provenance tracking, lifecycle management, and scope isolation.
 - **Self-Review** — Adaptive quality review system that evaluates completed work against stored lessons and project conventions.
+- **Self-Healing** — On build/test failures, spawns a sub-agent with the error context to autonomously fix issues before reporting them to the user.
 - **MCP Support** — [Model Context Protocol](https://modelcontextprotocol.io/) integration for connecting to external AI tool servers.
 - **Sequential Thinking** — Chain-of-thought reasoning tool for step-by-step problem decomposition.
-
-
 - **Session Locking** — Prevents multiple processes from operating on the same session directory.
 
 ### Session Management
@@ -52,32 +52,66 @@ Zesdex is a Rust-powered AI assistant that operates directly in your terminal vi
 ```
 src/
 ├── main.rs                    # Entry point: single-process, daemon, or attach mode
+├── resources.rs               # Embedded resources (help text, system prompts)
 ├── app/
 │   ├── state/                 # AppStateRest — immutable-rest state model
 │   │   ├── rest.rs            # Core state struct
 │   │   ├── types.rs           # Overlay, Toast, Origin enums
 │   │   ├── snapshot.rs        # State snapshots for IPC
 │   │   ├── diff.rs            # Diff-based state synchronization
-│   │   └── runtime.rs         # Runtime state mutations
+│   │   ├── runtime.rs         # Runtime state mutations
+│   │   └── misc.rs            # DirCache and miscellaneous state helpers
 │   ├── runtime/               # Action dispatch and event loop
 │   │   ├── actions/           # Action enum and apply_action reducer
 │   │   ├── stream/            # LLM streaming and tool execution
 │   │   │   └── tools/         # Tool harness integration
+│   │   │   └── turn.rs        # Turn orchestration
 │   │   ├── event_loop/        # Main event loop and shortsend
-│   │   └── commands.rs        # Slash command dispatch
+│   │   ├── commands.rs        # Slash command dispatch
-│   ├── mode/                  # UI modes and overlays (16 overlays)
+│   │   └── shortsend.rs       # Short-lived async send helper
+│   ├── mode/                  # UI modes and overlays (13 modes)
+│   │   ├── bash.rs            # Bash panel mode
+│   │   ├── editor.rs          # Multi-line editor mode
+│   │   ├── effort.rs          # Effort level selector
+│   │   ├── help.rs            # Help overlay
+│   │   ├── key_input.rs       # Raw key input mode
+│   │   ├── loading.rs         # Loading spinner overlay
+│   │   ├── mcp.rs             # MCP server management
+│   │   ├── quit_confirm.rs    # Quit confirmation dialog
+│   │   ├── rewind.rs          # Session rewind mode
+│   │   ├── settings.rs        # Settings panel
+│   │   ├── todo.rs            # Task list overlay
+│   │   └── workflow.rs        # Workflow visualization
 │   ├── harness.rs             # Tool harness for agent execution
-│   ├── workflow/              # Workflow engine (script DSL, executor)
+│   ├── workflow/              # Workflow engine
+│   │   ├── script.rs          # Workflow script DSL
+│   │   └── engine.rs          # Workflow executor
 │   ├── mcp/                   # MCP client manager
-│   ├── subagent/              # Sub-agent spawn, context, events
+│   │   └── manager.rs         # MCP server lifecycle and tool exposure
+│   ├── subagent/              # Sub-agent management
+│   │   ├── spawn.rs           # AgentDefinition and spawning
+│   │   ├── engine.rs          # Sub-agent event loop
+│   │   ├── context.rs         # Context construction for sub-agents
+│   │   └── event.rs           # Progress event types
 │   ├── bgbash/                # Background bash job management
-│   ├── review/                # Self-review quality system
+│   │   ├── job.rs             # Background job handle
+│   │   └── control.rs         # Bash control (bg/fg/kill)
+│   ├── lsp/                   # LSP client management
+│   │   ├── client.rs          # LSP client connection wrapper
+│   │   └── provisioner.rs     # Auto-provisioning of LSP servers
+│   └── review/                # Self-review quality system
 ├── controller/
 │   ├── input.rs               # Key event → Action mapping
 │   └── command.rs             # Slash command parser
 ├── dto/
 │   ├── chat/                  # Message, ToolCall, Role types
+│   │   ├── message.rs         # Chat message types
+│   │   ├── tool.rs            # Tool call/result types
+│   │   └── mod.rs
 │   └── provider/              # AI provider request/response/usage types
+│       ├── request.rs         # Provider request schema
+│       ├── response.rs        # Provider response schema
+│       └── usage.rs           # Token usage tracking
 ├── ipc/
 │   ├── protocol.rs            # ClientRequest, DaemonFrame, StatePayload
 │   ├── server.rs              # Unix socket server
@@ -94,13 +128,30 @@ src/
 │   ├── memory.rs              # Persistent memory with frontmatter
 │   ├── editlog.rs             # Edit history tracking
 │   ├── msglog/                # Message log (SQLite-backed)
+│   │   ├── schema.rs          # SQLite schema
+│   │   ├── query.rs           # Query helpers
+│   │   ├── blobs.rs           # Large blob storage
+│   │   └── summary.rs         # Session summarization
 │   ├── agent_def/             # Agent definitions (builtin, global, session)
+│   │   ├── builtin.rs         # Built-in agent profiles
+│   │   ├── global.rs          # Global agent config
+│   │   └── session.rs         # Per-session agent config
+│   ├── conversation.rs        # Conversation helpers
 │   └── session_lock.rs        # Flock-based session locking
 ├── service/
 │   ├── provider.rs            # AI provider abstraction
 │   └── oauth/                 # OAuth PKCE flow with loopback server
-├── tool/                      # 28 tool implementations
+│       ├── loopback.rs        # Local HTTP server for OAuth redirect
+│       ├── manager.rs         # OAuth token manager
+│       ├── pkce.rs            # PKCE code challenge/verifier
+│       └── mod.rs
+├── tool/                      # 33 tool implementations
 │   ├── fs/                    # read, write, edit, delete
+│   │   ├── read.rs
+│   │   ├── write.rs
+│   │   ├── edit.rs
+│   │   ├── delete.rs
+│   │   └── helpers.rs         # Path resolution and validation
 │   ├── search.rs              # grep, glob
 │   ├── shell.rs               # bash
 │   ├── bash_tools.rs          # bash_output, bash_kill
@@ -108,18 +159,31 @@ src/
 │   ├── git_worktree.rs        # git worktree management
 │   ├── git_cred.rs            # git credential store/get/erase
 │   ├── memory/                # remember, forget, recall
+│   │   ├── remember.rs
+│   │   ├── forget.rs
+│   │   └── recall.rs
 │   ├── plan.rs                # plan_enter, plan_ready
 │   ├── seqthink.rs            # Sequential thinking
 │   ├── workflow.rs            # workflow_run, note_finding
-│   ├── utility/               # cd, dir_list, dir_cache_update, pong, todowrite
+│   ├── utility/               # cd, dir_list, dir_cache_update, pong, todowrite, todofinish
+│   │   ├── cd.rs
+│   │   ├── dir_list.rs
+│   │   ├── dir_cache_update.rs
+│   │   ├── pong.rs
+│   │   ├── todowrite.rs
+│   │   └── todofinish.rs
+│   ├── lsp/                   # LSP tools (connect, diagnostics, hover, etc.)
+│   │   └── mod.rs
 │   └── shell_filter/          # Shell output filtering (credentials, git)
-├── view/                      # TUI rendering
+│       ├── credentials.rs
-│   ├── chat.rs                # Chat transcript with markdown
+│       ├── git.rs
-│   ├── markdown.rs            # Markdown → ratatui spans
+│       └── mod.rs
-│   ├── status.rs              # Status bar
+└── view/                      # TUI rendering
-│   ├── theme.rs               # Color scheme
+    ├── chat.rs                # Chat transcript with markdown
-│   └── workflow.rs            # Workflow visualization
+    ├── markdown.rs            # Markdown → ratatui spans
-└── resources.rs               # Embedded resources (help text, system prompts)
+    ├── status.rs              # Status bar
+    ├── theme.rs               # Color scheme
+    └── workflow.rs            # Workflow visualization
 ```
 
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