refactor: massive codebase restructuring — naming, splitting, DRY

Crate renames:
  - zesdex-entities::seaorm → domain (misleading name, no SeaORM used)
  - zesdex-dto → merged into zesdex-entities (100% re-exports)
  - zesdex-libs → zesdex-infra (vague name)

Module renames:
  - app/harness → guard (misleading: safety gatekeeper, not test harness)
  - runtime/commands → action_dispatch (name clashed with controller/command)
  - resources → prompts (embedded prompt text, not general resources)
  - tool/seqthink → sequential_think (unreadable abbreviation)
  - msglog/query → insert (module only inserts, never queries)

Dead code removal:
  - app/mode/help.rs (orphaned — not declared in mod.rs)
  - app/mode/loading.rs (orphaned — not declared in mod.rs)

File splitting (71 new files, avg ~115 lines/file):
  - app/runtime/actions/: 1→8 files (was 2030 lines)
  - view/overlays/: 1→16 files (was 1167 lines)
  - tool/lsp/: 1→8 per-tool files (was 909 lines)
  - main.rs: 1→5 files (session, daemon, attach, event_loop)
  - workflow/engine + hive_mind: 2→10 files
  - subagent/engine + auto: 2→9 files
  - lsp/provisioner: 1→5 files
  - review/: 1→6 files
  - guard/: 1→2 files (extracted patterns)
  - state/misc: 1→3 files (input, scroll)
  - mcp/: 1→3 files (transport, adapter)
  - stream/json_repair extracted from turn.rs

DRY:
  - Pattern constants (STUB_PATTERNS etc) in guard/patterns shared with subagent
  - 3 near-identical background spawners → 1 generic + thin wrappers
  - Shared spawn_subagent_with_drain() extracted
  - Shared create_session() in main
  - write_osc52 deduplicated

Bug fixes:
  - archive_message(): sess.db → db (wrong variable name)
  - execute_one_tool(): wrong parameter name
  - check_credential_read() function was missing (restored from test expectations)

crates/zesdex-entities/src/domain/common/message.rs

@@ -0,0 +1,111 @@
+#![allow(
+    clippy::cast_possible_truncation,
+    clippy::cast_sign_loss,
+    clippy::cast_precision_loss,
+    clippy::cast_possible_wrap
+)]
+//! Chat message types shared across the entity layer: `Role` and `ChatMessage`
+//! with convenience constructors.
+use serde::{Deserialize, Serialize};
+
+/// The conversation participant who authored a message.
+#[derive(Debug, Clone, PartialEq, Eq, Serialize, Deserialize)]
+pub enum Role {
+    #[serde(rename = "user")]
+    User,
+    #[serde(rename = "assistant")]
+    Assistant,
+    #[serde(rename = "system")]
+    System,
+    #[serde(rename = "tool")]
+    Tool,
+}
+
+impl Role {
+    /// Return the role as a lowercase string.
+    pub fn as_str(&self) -> &'static str {
+        match self {
+            Role::User => "user",
+            Role::Assistant => "assistant",
+            Role::System => "system",
+            Role::Tool => "tool",
+        }
+    }
+}
+
+impl std::fmt::Display for Role {
+    fn fmt(&self, f: &mut std::fmt::Formatter<'_>) -> std::fmt::Result {
+        f.write_str(self.as_str())
+    }
+}
+
+/// A single message in a conversation, compatible with the OpenAI/Anthropic
+/// chat-completion API structures.
+#[derive(Debug, Clone, Serialize, Deserialize)]
+pub struct ChatMessage {
+    pub role: Role,
+    pub content: Option<String>,
+    #[serde(skip_serializing_if = "Option::is_none")]
+    pub tool_calls: Option<Vec<super::tool_call::ToolCall>>,
+    #[serde(skip_serializing_if = "Option::is_none")]
+    pub tool_call_id: Option<String>,
+    #[serde(skip_serializing_if = "Option::is_none")]
+    pub name: Option<String>,
+}
+
+impl ChatMessage {
+    /// Build a user-role message with the given text content.
+    pub fn user(content: impl Into<String>) -> Self {
+        ChatMessage {
+            role: Role::User,
+            content: Some(content.into()),
+            tool_calls: None,
+            tool_call_id: None,
+            name: None,
+        }
+    }
+
+    /// Build an assistant-role message with an optional text response.
+    pub fn assistant(content: Option<String>) -> Self {
+        ChatMessage {
+            role: Role::Assistant,
+            content,
+            tool_calls: None,
+            tool_call_id: None,
+            name: None,
+        }
+    }
+
+    /// Build a system-role message with the given instruction text.
+    pub fn system(content: impl Into<String>) -> Self {
+        ChatMessage {
+            role: Role::System,
+            content: Some(content.into()),
+            tool_calls: None,
+            tool_call_id: None,
+            name: None,
+        }
+    }
+
+    /// Build a tool-role result message referencing a prior tool call.
+    pub fn tool(tool_call_id: String, content: String) -> Self {
+        ChatMessage {
+            role: Role::Tool,
+            content: Some(content),
+            tool_calls: None,
+            tool_call_id: Some(tool_call_id),
+            name: None,
+        }
+    }
+
+    /// Alias for `tool`, used throughout the codebase for tool results.
+    pub fn tool_result(tool_call_id: String, content: String) -> Self {
+        ChatMessage {
+            role: Role::Tool,
+            content: Some(content),
+            tool_calls: None,
+            tool_call_id: Some(tool_call_id),
+            name: None,
+        }
+    }
+}